Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoid-associated protein | ASC92_12070 | Not Available | Positive | 3704754 - 3705086 | 11867.6 |
| recombination protein recr | ASC92_12075 | Not Available | Positive | 3705096 - 3705686 | 21065.3 |
| glutathione metabolism protein | ASC92_12080 | Not Available | Positive | 3705702 - 3706094 | 14250.5 |
| abc transporter substrate-binding protein | ASC92_12085 | Not Available | Positive | 3706233 - 3707270 | 36296.8 |
| mannosyltransferase | ASC92_12090 | Not Available | Positive | 3707316 - 3708131 | 29760.8 |
| abc transporter permease | ASC92_12095 | Not Available | Positive | 3708131 - 3708967 | 30360.7 |
| hypothetical protein | ASC92_12100 | Not Available | Positive | 3709035 - 3710219 | 42829.6 |
| lytic transglycosylase | ASC92_12105 | Not Available | Negative | 3710244 - 3711842 | 57719.9 |
| hydroxyacylglutathione hydrolase | ASC92_12110 | Not Available | Negative | 3711839 - 3712627 | 28226.5 |
| methyltransferase type 11 | ASC92_12115 | Not Available | Positive | 3712647 - 3713396 | 28274.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
