Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mate family efflux transporter | ASC92_12020 | Not Available | Negative | 3688760 - 3690103 | 47825.8 |
| hypothetical protein | ASC92_12025 | Not Available | Negative | 3690100 - 3691836 | 63298.9 |
| 50s ribosomal protein l31 type b | ASC92_12030 | Not Available | Negative | 3691916 - 3692185 | 10013.9 |
| oxidoreductase | ASC92_12035 | Not Available | Positive | 3692367 - 3693434 | 38153.4 |
| transcription termination factor rho | ASC92_12040 | Not Available | Negative | 3693489 - 3694754 | 47505.9 |
| thioredoxin | ASC92_12045 | Not Available | Negative | 3694937 - 3695269 | 12073.7 |
| exonuclease | ASC92_12050 | Not Available | Positive | 3695424 - 3698003 | 92801.7 |
| dna helicase uvrd | ASC92_12055 | Not Available | Positive | 3698000 - 3701254 | 118608.0 |
| nad(fad)-utilizing dehydrogenase | ASC92_12060 | Not Available | Positive | 3701251 - 3702489 | 43255.2 |
| dna polymerase iii subunit gamma/tau | ASC92_12065 | Not Available | Positive | 3702854 - 3704698 | 65681.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
