Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretion system family protein | ASC92_11865 | Not Available | Negative | 3654900 - 3655631 | 26816.2 |
| conjugal transfer protein | ASC92_11870 | Not Available | Negative | 3655624 - 3658131 | 94002.0 |
| type iv secretion system protein virb3 | ASC92_11875 | Not Available | Negative | 3658144 - 3658512 | 14053.5 |
| transposase | ASC92_11880 | Not Available | Negative | 3658526 - 3658858 | 11586.5 |
| hypothetical protein | ASC92_11885 | Not Available | Negative | 3658855 - 3659355 | 17400.4 |
| cobyrinic acid ac-diamide synthase | ASC92_11890 | Not Available | Positive | 3659659 - 3660447 | 28456.8 |
| chromosome partitioning protein parb | ASC92_11895 | Not Available | Positive | 3660444 - 3661343 | 32696.8 |
| arac family transcriptional regulator | ASC92_11900 | Not Available | Negative | 3661452 - 3662429 | 35885.6 |
| luxr family transcriptional regulator | ASC92_11905 | Not Available | Positive | 3662754 - 3663464 | 26153.3 |
| n-acylhomoserine lactone synthase | ASC92_11910 | Not Available | Negative | 3663507 - 3664103 | 22089.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
