Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid deaminase | ASC92_01615 | Not Available | Positive | 368784 - 370085 | 46936.3 |
| rpir family transcriptional regulator | ASC92_01620 | Not Available | Positive | 370096 - 371007 | 31996.5 |
| d-aminoacylase | ASC92_01625 | Not Available | Positive | 371004 - 372512 | 54223.0 |
| hypothetical protein | ASC92_01630 | Not Available | Positive | 372602 - 372787 | 6704.78 |
| lysr family transcriptional regulator | ASC92_01635 | Not Available | Negative | 372811 - 373734 | 33944.2 |
| abc transporter substrate-binding protein | ASC92_01640 | Not Available | Positive | 373850 - 374746 | 31998.5 |
| aminotransferase | ASC92_01645 | Not Available | Positive | 374750 - 376045 | 47329.7 |
| hypothetical protein | ASC92_01650 | Not Available | Negative | 376149 - 376481 | 11658.8 |
| hypothetical protein | ASC92_01655 | Not Available | Positive | 376502 - 377116 | 21827.6 |
| hypothetical protein | ASC92_01660 | Not Available | Negative | 377172 - 378692 | 53913.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
