Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | ASC92_11765 | Not Available | Positive | 3636520 - 3636828 | 11489.9 |
| tetr family transcriptional regulator | ASC92_11770 | Not Available | Negative | 3636838 - 3637410 | 21173.3 |
| oxidoreductase | ASC92_11775 | Not Available | Positive | 3637536 - 3638294 | 27073.7 |
| 3-hydroxyisobutyrate dehydrogenase | ASC92_11780 | Not Available | Negative | 3638344 - 3639078 | 25662.4 |
| hypothetical protein | ASC92_11785 | Not Available | Negative | 3639122 - 3640099 | 34461.9 |
| mandelate racemase | ASC92_11790 | Not Available | Negative | 3640128 - 3641294 | 43435.9 |
| lysr family transcriptional regulator | ASC92_11795 | Not Available | Positive | 3641397 - 3642296 | 32685.2 |
| hypothetical protein | ASC92_11800 | Not Available | Negative | 3642432 - 3642665 | 8526.75 |
| hypothetical protein | ASC92_11805 | Not Available | Positive | 3643198 - 3643395 | 6741.18 |
| hypothetical protein | ASC92_11810 | Not Available | Positive | 3643395 - 3644726 | 49376.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
