Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC92_11615 | Not Available | Negative | 3606976 - 3607332 | 13117.7 |
| oxidoreductase | ASC92_11620 | Not Available | Negative | 3607351 - 3608343 | 34817.5 |
| nadph:quinone reductase | ASC92_11625 | Not Available | Negative | 3608703 - 3609593 | 32094.0 |
| short-chain dehydrogenase | ASC92_11630 | Not Available | Negative | 3609590 - 3610354 | 25562.7 |
| catechol 1,2-dioxygenase | ASC92_11635 | Not Available | Negative | 3610375 - 3611241 | 31337.2 |
| laci family transcriptional regulator | ASC92_11640 | Not Available | Positive | 3611376 - 3612410 | 36945.0 |
| hypothetical protein | ASC92_11645 | Not Available | Negative | 3612423 - 3612764 | 12401.8 |
| hypothetical protein | ASC92_11650 | Not Available | Negative | 3612781 - 3614454 | 61167.8 |
| hypothetical protein | ASC92_11655 | Not Available | Negative | 3614486 - 3614680 | 7729.38 |
| lysr family transcriptional regulator | ASC92_11660 | Not Available | Positive | 3614781 - 3615671 | 32315.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
