Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toxin | ASC92_11565 | Not Available | Positive | 3597457 - 3598254 | 29426.6 |
| lysr family transcriptional regulator | ASC92_11570 | Not Available | Negative | 3598199 - 3599119 | 33379.3 |
| acyl-coa dehydrogenase | ASC92_11575 | Not Available | Positive | 3599306 - 3600505 | 43303.1 |
| coa-transferase | ASC92_11580 | Not Available | Positive | 3600512 - 3601747 | 43590.1 |
| lactoylglutathione lyase | ASC92_11585 | Not Available | Positive | 3601761 - 3602192 | 15028.1 |
| hypothetical protein | ASC92_11590 | Not Available | Negative | 3602257 - 3602715 | 16367.8 |
| 2-methylisocitrate lyase | ASC92_11595 | Not Available | Positive | 3602829 - 3603659 | 28762.2 |
| uracil-dna glycosylase | ASC92_11600 | Not Available | Positive | 3603666 - 3604241 | 21492.2 |
| amidohydrolase | ASC92_11605 | Not Available | Negative | 3604248 - 3605924 | 59672.8 |
| laci family transcriptional regulator | ASC92_11610 | Not Available | Negative | 3605927 - 3606916 | 34247.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
