Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclase | ASC92_11515 | Not Available | Negative | 3587087 - 3587893 | 29890.4 |
| abc transporter permease | ASC92_11520 | Not Available | Negative | 3587948 - 3588733 | 27737.7 |
| abc transporter permease | ASC92_11525 | Not Available | Negative | 3588730 - 3589500 | 27037.2 |
| abc transporter | ASC92_11530 | Not Available | Negative | 3589493 - 3590350 | 30749.3 |
| metal abc transporter substrate-binding protein | ASC92_11535 | Not Available | Negative | 3590347 - 3591291 | 33405.4 |
| tetr family transcriptional regulator | ASC92_11540 | Not Available | Negative | 3591288 - 3592040 | 27567.0 |
| acetoacetyl-coa synthetase | ASC92_11545 | Not Available | Positive | 3592141 - 3594135 | 73122.4 |
| guanylate cyclase | ASC92_11550 | Not Available | Negative | 3594168 - 3596090 | 70051.0 |
| proline hydroxylase | ASC92_11555 | Not Available | Negative | 3596276 - 3596992 | 26494.6 |
| hypothetical protein | ASC92_11560 | Not Available | Positive | 3597158 - 3597460 | 10749.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
