Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| benzoyl-coa oxygenase subunit b | ASC92_11465 | Not Available | Positive | 3577827 - 3579254 | 53824.6 |
| benzoyl-coa oxygenase | ASC92_11470 | Not Available | Positive | 3579384 - 3580670 | 46348.2 |
| acyl dehydratase | ASC92_11475 | Not Available | Positive | 3580681 - 3581124 | 16260.4 |
| adhesin | ASC92_11480 | Not Available | Negative | 3581194 - 3581658 | 13519.7 |
| dienelactone hydrolase | ASC92_11485 | Not Available | Negative | 3581837 - 3582865 | 36692.0 |
| arac family transcriptional regulator | ASC92_11490 | Not Available | Negative | 3582975 - 3584102 | 39899.1 |
| rrf2 family transcriptional regulator | ASC92_11495 | Not Available | Positive | 3584209 - 3584670 | 16085.5 |
| thioredoxin reductase | ASC92_11500 | Not Available | Positive | 3584660 - 3585562 | 30971.2 |
| Trna-gly | Not Available | Not Available | Positive | 3585626 - 3585701 | Not Available |
| fumarylacetoacetase | ASC92_11510 | Not Available | Negative | 3585754 - 3587076 | 47677.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
