Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrimidine utilization transport protein g | ASC92_11365 | Not Available | Negative | 3555325 - 3556608 | 43834.0 |
| esterase | ASC92_11370 | Not Available | Negative | 3556676 - 3557098 | 15310.3 |
| hypothetical protein | ASC92_11375 | Not Available | Positive | 3557189 - 3558511 | 47047.2 |
| enoyl-coa hydratase | ASC92_11380 | Not Available | Negative | 3558523 - 3559299 | 26643.2 |
| feruloyl-coa synthase | ASC92_11385 | Not Available | Negative | 3559331 - 3561133 | 65005.4 |
| 3-hydroxyacyl-coa dehydrogenase | ASC92_11390 | Not Available | Negative | 3561258 - 3562208 | 33980.7 |
| abc transporter permease | ASC92_11395 | Not Available | Negative | 3562205 - 3563413 | 43085.1 |
| 3-keto-5-aminohexanoate cleavage protein | ASC92_11400 | Not Available | Negative | 3563446 - 3564369 | 33505.3 |
| crp/fnr family transcriptional regulator | ASC92_11405 | Not Available | Positive | 3564498 - 3565205 | 26069.2 |
| abc transporter atp-binding protein | ASC92_11410 | Not Available | Negative | 3565222 - 3565923 | 25362.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
