Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | ASC92_11160 | Not Available | Negative | 3518385 - 3519833 | 53917.0 |
| two-component system response regulator | ASC92_11165 | Not Available | Negative | 3519830 - 3520624 | 29258.2 |
| gtpase | ASC92_11170 | Not Available | Positive | 3521191 - 3522129 | 32761.5 |
| merr family transcriptional regulator | ASC92_11175 | Not Available | Negative | 3522131 - 3522535 | 14988.0 |
| heavy metal transporter | ASC92_11180 | Not Available | Negative | 3522532 - 3522726 | 6801.99 |
| copper-transporting atpase | ASC92_11185 | Not Available | Positive | 3522870 - 3525104 | 77118.1 |
| gnat family acetyltransferase | ASC92_11190 | Not Available | Negative | 3525111 - 3525593 | 18365.2 |
| fatty acid hydroxylase | ASC92_11195 | Not Available | Negative | 3525652 - 3526782 | 42637.7 |
| beta-ketoacyl synthase | ASC92_11200 | Not Available | Negative | 3526818 - 3528101 | 43483.6 |
| phosphopantetheine-binding protein | ASC92_11205 | Not Available | Negative | 3528098 - 3528388 | 10219.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
