Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homoserine o-acetyltransferase | ASC92_10960 | Not Available | Negative | 3477168 - 3478331 | 42667.4 |
| hypothetical protein | ASC92_10965 | Not Available | Negative | 3478456 - 3479019 | 20226.5 |
| rna-binding protein | ASC92_10970 | Not Available | Positive | 3479475 - 3480026 | 16625.0 |
| short-chain dehydrogenase | ASC92_10975 | Not Available | Negative | 3480110 - 3480892 | 27267.8 |
| lps export abc transporter periplasmic protein lptc | ASC92_10980 | Not Available | Negative | 3480893 - 3481543 | 23719.1 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase | ASC92_10985 | Not Available | Negative | 3481540 - 3482088 | 19677.7 |
| arabinose 5-phosphate isomerase | ASC92_10990 | Not Available | Negative | 3482088 - 3483089 | 34797.6 |
| potassium transporter | ASC92_10995 | Not Available | Positive | 3483266 - 3485251 | 71475.0 |
| hypothetical protein | ASC92_11000 | Not Available | Negative | 3485306 - 3486262 | 33178.5 |
| crp/fnr family transcriptional regulator | ASC92_11005 | Not Available | Negative | 3486356 - 3486817 | 16648.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
