Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyceraldehyde-3-phosphate dehydrogenase | ASC92_10805 | Not Available | Negative | 3433286 - 3434287 | 36255.6 |
| transketolase | ASC92_10810 | Not Available | Negative | 3434347 - 3436452 | 75237.6 |
| s-adenosylmethionine decarboxylase proenzyme | ASC92_10815 | Not Available | Positive | 3436600 - 3436980 | 13568.3 |
| nucleotidyltransferase | ASC92_10820 | Not Available | Positive | 3437004 - 3437717 | 25324.4 |
| xaa-pro aminopeptidase | ASC92_10825 | Not Available | Positive | 3437714 - 3439114 | 51547.3 |
| penicillin-binding protein 1c | ASC92_10830 | Not Available | Negative | 3439187 - 3441475 | 82810.6 |
| alpha-2-macroglobulin | ASC92_10835 | Not Available | Negative | 3441616 - 3447621 | 218499.0 |
| fumarate reductase | ASC92_10840 | Not Available | Negative | 3448033 - 3449676 | 59101.1 |
| spermidine synthase | ASC92_10845 | Not Available | Negative | 3449684 - 3451225 | 56426.2 |
| hypothetical protein | ASC92_10850 | Not Available | Negative | 3451237 - 3451455 | 7799.95 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
