Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidylprolyl isomerase | ASC92_10755 | Not Available | Positive | 3424921 - 3425397 | 17443.9 |
| metal-chelation protein chad | ASC92_10760 | Not Available | Negative | 3425422 - 3426969 | 56125.9 |
| extradiol dioxygenase | ASC92_10765 | Not Available | Positive | 3427145 - 3427567 | 15539.5 |
| pirin | ASC92_10770 | Not Available | Positive | 3427696 - 3428763 | 38593.4 |
| hypothetical protein | ASC92_10775 | Not Available | Negative | 3428786 - 3429076 | 10610.9 |
| mfs transporter | ASC92_10780 | Not Available | Negative | 3429197 - 3430204 | 34862.4 |
| tartrate dehydrogenase | ASC92_10785 | Not Available | Negative | 3430272 - 3431363 | 39420.1 |
| antibiotic biosynthesis monooxygenase | ASC92_10790 | Not Available | Positive | 3431585 - 3431893 | 10910.2 |
| hypothetical protein | ASC92_10795 | Not Available | Positive | 3431996 - 3432589 | 21345.9 |
| hypothetical protein | ASC92_10800 | Not Available | Positive | 3432784 - 3433230 | 15901.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
