Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxylate/hydroxypyruvate reductase a | ASC92_10705 | Not Available | Negative | 3414866 - 3415804 | 33336.3 |
| microcin abc transporter atp-binding protein | ASC92_10710 | Not Available | Negative | 3415804 - 3417456 | 58970.0 |
| abc transporter permease | ASC92_10715 | Not Available | Negative | 3417460 - 3418302 | 30207.8 |
| abc transporter permease | ASC92_10720 | Not Available | Negative | 3418302 - 3419276 | 34978.0 |
| peptide abc transporter substrate-binding protein | ASC92_10725 | Not Available | Negative | 3419293 - 3420861 | 57489.0 |
| aldolase | ASC92_10730 | Not Available | Negative | 3420932 - 3421723 | 28746.0 |
| pirin | ASC92_10735 | Not Available | Negative | 3421998 - 3422852 | 30026.5 |
| fmn reductase | ASC92_10740 | Not Available | Negative | 3422852 - 3423436 | 21544.0 |
| doxx family protein | ASC92_10745 | Not Available | Negative | 3423468 - 3423866 | 13585.2 |
| lysr family transcriptional regulator | ASC92_10750 | Not Available | Positive | 3423954 - 3424880 | 33336.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
