Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC92_10605 | Not Available | Positive | 3395491 - 3395811 | 11849.0 |
| abc transporter permease | ASC92_10610 | Not Available | Positive | 3395824 - 3396711 | 30826.8 |
| fatty acid desaturase | ASC92_10615 | Not Available | Negative | 3396699 - 3397637 | 35683.6 |
| gntr family transcriptional regulator | ASC92_10620 | Not Available | Negative | 3397700 - 3398395 | 25335.6 |
| pyridine nucleotide-disulfide oxidoreductase | ASC92_10625 | Not Available | Negative | 3398392 - 3399669 | 44034.0 |
| (2fe-2s)-binding protein | ASC92_10630 | Not Available | Negative | 3399666 - 3399914 | 8586.59 |
| d-amino acid oxidase | ASC92_10635 | Not Available | Negative | 3399911 - 3401014 | 38996.6 |
| hydroxyproline-2-epimerase | ASC92_10640 | Not Available | Negative | 3401026 - 3401961 | 32693.6 |
| abc transporter substrate-binding protein | ASC92_10645 | Not Available | Negative | 3401976 - 3403109 | 39748.8 |
| 4-hydroxy-tetrahydrodipicolinate synthase | ASC92_10650 | Not Available | Negative | 3403148 - 3404062 | 33472.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
