Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein pile | ASC92_10445 | Not Available | Positive | 3362139 - 3362615 | 17157.7 |
| hypothetical protein | ASC92_10450 | Not Available | Positive | 3362567 - 3363187 | 21857.9 |
| pilin | ASC92_10460 | Not Available | Negative | 3366606 - 3367109 | 17497.1 |
| 3',5'-cyclic-nucleotide phosphodiesterase | ASC92_10465 | Not Available | Negative | 3367316 - 3368119 | 29135.0 |
| guanylate cyclase | ASC92_10470 | Not Available | Negative | 3368149 - 3370401 | 80538.5 |
| hypothetical protein | ASC92_10475 | Not Available | Negative | 3370453 - 3371106 | 22683.5 |
| protein phosphatase | ASC92_10480 | Not Available | Negative | 3371173 - 3371982 | 28650.2 |
| hypothetical protein | ASC92_10485 | Not Available | Negative | 3372011 - 3372694 | 23931.2 |
| succinate--coa ligase | ASC92_10490 | Not Available | Negative | 3372815 - 3373708 | 31077.7 |
| succinyl-coa synthetase subunit beta | ASC92_10495 | Not Available | Negative | 3373719 - 3374885 | 41350.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
