Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC92_10345 | Not Available | Positive | 3341285 - 3342427 | 39837.2 |
| alkylhydroperoxidase | ASC92_10350 | Not Available | Negative | 3342446 - 3342907 | 17264.6 |
| rna polymerase subunit sigma-24 | ASC92_10355 | Not Available | Negative | 3342998 - 3343888 | 33678.2 |
| ferritin | ASC92_10360 | Not Available | Negative | 3343972 - 3344829 | 33624.1 |
| glutathione peroxidase | ASC92_10365 | Not Available | Positive | 3344958 - 3345572 | 22068.4 |
| glutathione s-transferase | ASC92_10370 | Not Available | Negative | 3345840 - 3346451 | 22516.2 |
| adenylosuccinate lyase | ASC92_10375 | Not Available | Positive | 3346581 - 3347960 | 50517.7 |
| hypothetical protein | ASC92_10380 | Not Available | Positive | 3347960 - 3348520 | 20656.7 |
| hypothetical protein | ASC92_10385 | Not Available | Negative | 3348531 - 3348836 | 11410.8 |
| fe-s oxidoreductase | ASC92_10390 | Not Available | Negative | 3348839 - 3349312 | 17845.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
