Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC92_01465 | Not Available | Positive | 331391 - 331708 | 11460.1 |
| protein tyrosine phosphatase | ASC92_01470 | Not Available | Positive | 331811 - 332245 | 15774.5 |
| tyrosine protein kinase | ASC92_01475 | Not Available | Positive | 332242 - 334500 | 81600.3 |
| capsular biosynthesis protein | ASC92_01480 | Not Available | Positive | 334698 - 336692 | 72602.5 |
| hypothetical protein | ASC92_01485 | Not Available | Negative | 336760 - 339783 | 110735.0 |
| hypothetical protein | ASC92_01490 | Not Available | Negative | 339780 - 340406 | 22772.7 |
| luxr family transcriptional regulator | ASC92_01495 | Not Available | Positive | 341204 - 341947 | 26744.4 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | ASC92_01500 | Not Available | Positive | 342147 - 342764 | 22002.4 |
| cytochrome b | ASC92_01505 | Not Available | Positive | 342779 - 344215 | 54080.6 |
| cytochrome c | ASC92_01510 | Not Available | Positive | 344251 - 345027 | 28958.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
