Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asnc family transcriptional regulator | ASC92_10140 | Not Available | Positive | 3293002 - 3293478 | 17508.1 |
| abc transporter substrate-binding protein | ASC92_10145 | Not Available | Positive | 3293569 - 3294327 | 27012.4 |
| amino acid abc transporter permease | ASC92_10150 | Not Available | Positive | 3294354 - 3295124 | 28916.9 |
| hypothetical protein | ASC92_10155 | Not Available | Negative | 3295566 - 3296279 | 25438.7 |
| arabinose abc transporter permease | ASC92_10165 | Not Available | Positive | 3296937 - 3298562 | 58317.2 |
| cytochrome c oxidase subunit iv | ASC92_10170 | Not Available | Negative | 3298591 - 3298905 | 12117.4 |
| bb3-type cytochrome oxidase subunit iv | ASC92_10175 | Not Available | Negative | 3298914 - 3299615 | 26005.9 |
| bb3-type cytochrome oxidase subunit iii | ASC92_10180 | Not Available | Negative | 3299626 - 3300243 | 21966.0 |
| cytochrome c oxidase subunit i | ASC92_10185 | Not Available | Negative | 3300303 - 3302069 | 64693.2 |
| cytochrome b | ASC92_10190 | Not Available | Negative | 3302096 - 3303259 | 42138.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
