Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC92_10090 | Not Available | Negative | 3278954 - 3279463 | 18648.2 |
| peptide deformylase | ASC92_10095 | Not Available | Negative | 3279468 - 3279986 | 19257.3 |
| peptidoglycan-binding protein | ASC92_10100 | Not Available | Positive | 3280146 - 3281363 | 44171.1 |
| dna processing protein dpra | ASC92_10105 | Not Available | Positive | 3281398 - 3282543 | 39407.2 |
| protein smg | ASC92_10110 | Not Available | Positive | 3282685 - 3283203 | 19021.6 |
| hypothetical protein | ASC92_10115 | Not Available | Negative | 3283225 - 3285612 | 86375.8 |
| preprotein translocase subunit secf | ASC92_10120 | Not Available | Negative | 3285658 - 3286611 | 34936.9 |
| preprotein translocase subunit secd | ASC92_10125 | Not Available | Negative | 3286630 - 3288513 | 67922.7 |
| preprotein translocase subunit yajc | ASC92_10130 | Not Available | Negative | 3288592 - 3288927 | 11654.6 |
| indolepyruvate ferredoxin oxidoreductase | ASC92_10135 | Not Available | Negative | 3289214 - 3292825 | 131491.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
