Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylaminoimidazole carboxylase | ASC92_09990 | Not Available | Negative | 3260362 - 3261564 | 42428.1 |
| n5-carboxyaminoimidazole ribonucleotide mutase | ASC92_09995 | Not Available | Negative | 3261561 - 3262112 | 18481.4 |
| thioredoxin | ASC92_10000 | Not Available | Positive | 3262149 - 3263069 | 33789.3 |
| heat-shock protein | ASC92_10005 | Not Available | Positive | 3263204 - 3263656 | 15304.3 |
| phosphoribosylaminoimidazole-succinocarboxamide synthase | ASC92_10010 | Not Available | Negative | 3263676 - 3264581 | 32897.5 |
| fructose-1,6-bisphosphate aldolase | ASC92_10015 | Not Available | Negative | 3264686 - 3265750 | 38223.9 |
| asnc family transcriptional regulator | ASC92_10020 | Not Available | Negative | 3265870 - 3266355 | 17758.9 |
| 1-aminocyclopropane-1-carboxylate deaminase | ASC92_10025 | Not Available | Positive | 3266492 - 3267508 | 36653.0 |
| pyruvate kinase | ASC92_10030 | Not Available | Negative | 3267610 - 3269058 | 51759.8 |
| phosphoglycerate kinase | ASC92_10035 | Not Available | Negative | 3269146 - 3270339 | 41120.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
