Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cro/cl family transcriptional regulator | ASC92_09940 | Not Available | Positive | 3250975 - 3251709 | 27879.0 |
| orotidine 5'-phosphate decarboxylase | ASC92_09945 | Not Available | Negative | 3251817 - 3252638 | 29167.8 |
| uracil-dna glycosylase | ASC92_09950 | Not Available | Negative | 3252672 - 3253469 | 27461.1 |
| ribosomal-protein-alanine acetyltransferase | ASC92_09955 | Not Available | Negative | 3253466 - 3254008 | 19861.8 |
| trna threonylcarbamoyladenosine biosynthesis protein tsab | ASC92_09960 | Not Available | Negative | 3254017 - 3254730 | 24256.1 |
| deor family transcriptional regulator | ASC92_09965 | Not Available | Negative | 3254765 - 3255532 | 26378.0 |
| gdp-mannose pyrophosphatase | ASC92_09970 | Not Available | Positive | 3255612 - 3256199 | 21932.2 |
| peptidase m15 | ASC92_09975 | Not Available | Positive | 3256207 - 3257628 | 50575.6 |
| hypothetical protein | ASC92_09980 | Not Available | Positive | 3257801 - 3259363 | 53098.8 |
| translation factor sua5 | ASC92_09985 | Not Available | Negative | 3259364 - 3260365 | 34982.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
