Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | ASC92_09785 | Not Available | Negative | 3208446 - 3209411 | 35683.6 |
| hypothetical protein | ASC92_09790 | Not Available | Negative | 3209831 - 3210880 | 37173.9 |
| dehalogenase | ASC92_09800 | Not Available | Positive | 3214753 - 3215418 | 24919.1 |
| hypothetical protein | ASC92_09805 | Not Available | Positive | 3215454 - 3216521 | 38846.4 |
| 4-aminobutyrate aminotransferase | ASC92_09810 | Not Available | Positive | 3216518 - 3217876 | 47923.9 |
| asnc family transcriptional regulator | ASC92_09815 | Not Available | Positive | 3217892 - 3218392 | 18961.9 |
| tdcb | ASC92_09820 | Not Available | Negative | 3218408 - 3219379 | 34872.6 |
| ornithine cyclodeaminase | ASC92_09825 | Not Available | Negative | 3219385 - 3220377 | 36269.3 |
| amino acid abc transporter substrate-binding protein | ASC92_09830 | Not Available | Negative | 3220684 - 3221475 | 28216.2 |
| protein mbth | ASC92_09835 | Not Available | Negative | 3221921 - 3222142 | 8021.41 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
