Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine acetyltransferase | ASC92_01415 | Not Available | Positive | 317428 - 318018 | 20830.9 |
| aminotransferase degt | ASC92_01420 | Not Available | Positive | 318015 - 319100 | 39031.1 |
| hypothetical protein | ASC92_01425 | Not Available | Positive | 321423 - 322001 | 21341.7 |
| hypothetical protein | ASC92_01430 | Not Available | Negative | 322234 - 322434 | 7590.15 |
| udp-glucose 4-epimerase | ASC92_01435 | Not Available | Positive | 324298 - 325341 | 38650.6 |
| capsular biosynthesis protein | ASC92_01440 | Not Available | Positive | 325346 - 326473 | 41216.0 |
| udp-n-acetyl glucosamine 2-epimerase | ASC92_01445 | Not Available | Positive | 326500 - 327636 | 42614.2 |
| udp-phosphate galactose phosphotransferase | ASC92_01450 | Not Available | Positive | 327640 - 329481 | 67949.1 |
| acetyltransferase | ASC92_01455 | Not Available | Positive | 329478 - 330137 | 23280.3 |
| aminotransferase | ASC92_01460 | Not Available | Positive | 330144 - 331331 | 43162.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
