Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s8 | ASC92_09735 | Not Available | Negative | 3202133 - 3202528 | 14005.2 |
| 30s ribosomal protein s14 | ASC92_09740 | Not Available | Negative | 3202549 - 3202854 | 11382.9 |
| 50s ribosomal protein l5 | ASC92_09745 | Not Available | Negative | 3202863 - 3203402 | 20115.7 |
| 50s ribosomal protein l24 | ASC92_09750 | Not Available | Negative | 3203414 - 3203746 | 11800.5 |
| 50s ribosomal protein l14 | ASC92_09755 | Not Available | Negative | 3203759 - 3204127 | 13181.3 |
| hypothetical protein | ASC92_09760 | Not Available | Positive | 3204353 - 3205504 | 41690.7 |
| pyrroline-5-carboxylate reductase | ASC92_09765 | Not Available | Positive | 3205501 - 3206358 | 29470.4 |
| dehydratase | ASC92_09770 | Not Available | Negative | 3206361 - 3206831 | 17633.2 |
| 4-hydroxybenzoate octaprenyltransferase | ASC92_09775 | Not Available | Negative | 3206843 - 3207742 | 32772.1 |
| dna starvation/stationary phase protection protein | ASC92_09780 | Not Available | Negative | 3207732 - 3208307 | 20824.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
