Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit alpha | ASC92_09685 | Not Available | Negative | 3195799 - 3196788 | 36184.6 |
| 30s ribosomal protein s4 | ASC92_09690 | Not Available | Negative | 3196915 - 3197538 | 23538.2 |
| 30s ribosomal protein s11 | ASC92_09695 | Not Available | Negative | 3197669 - 3198073 | 14142.9 |
| 30s ribosomal protein s13 | ASC92_09700 | Not Available | Negative | 3198086 - 3198451 | 13801.0 |
| preprotein translocase subunit secy | ASC92_09705 | Not Available | Negative | 3198653 - 3199966 | 47398.2 |
| 50s ribosomal protein l15 | ASC92_09710 | Not Available | Negative | 3199994 - 3200425 | 14582.1 |
| 50s ribosomal protein l30 | ASC92_09715 | Not Available | Negative | 3200437 - 3200622 | 6762.44 |
| 30s ribosomal protein s5 | ASC92_09720 | Not Available | Negative | 3200658 - 3201176 | 18039.1 |
| 50s ribosomal protein l18 | ASC92_09725 | Not Available | Negative | 3201195 - 3201560 | 12723.3 |
| 50s ribosomal protein l6 | ASC92_09730 | Not Available | Negative | 3201575 - 3202108 | 19010.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
