Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | ASC92_09535 | Not Available | Negative | 3162951 - 3163715 | 26704.0 |
| hypothetical protein | ASC92_09540 | Not Available | Negative | 3163774 - 3164238 | 16736.1 |
| crp/fnr family transcriptional regulator | ASC92_09545 | Not Available | Negative | 3164235 - 3165008 | 28265.1 |
| long-chain fatty acid--coa ligase | ASC92_09550 | Not Available | Positive | 3165093 - 3167048 | 71301.5 |
| abc transporter atp-binding protein | ASC92_09555 | Not Available | Positive | 3167104 - 3167889 | 29264.5 |
| abc transporter permease | ASC92_09560 | Not Available | Positive | 3168052 - 3168981 | 33019.7 |
| abc transporter permease | ASC92_09565 | Not Available | Positive | 3168986 - 3170050 | 38483.1 |
| abc transporter permease | ASC92_09570 | Not Available | Positive | 3170106 - 3171437 | 48456.2 |
| abc transporter atp-binding protein | ASC92_09575 | Not Available | Positive | 3171522 - 3172334 | 29701.0 |
| amp-dependent synthetase | ASC92_09580 | Not Available | Positive | 3172625 - 3173875 | 44812.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
