Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | ASC92_09430 | Not Available | Negative | 3140592 - 3141974 | 50012.3 |
| xre family transcriptional regulator | ASC92_09435 | Not Available | Negative | 3141971 - 3142627 | 24033.8 |
| rna-binding protein | ASC92_09440 | Not Available | Negative | 3142746 - 3143579 | 30827.5 |
| cytidyltransferase | ASC92_09445 | Not Available | Positive | 3143663 - 3144733 | 40323.7 |
| nicotinate phosphoribosyltransferase | ASC92_09450 | Not Available | Positive | 3144805 - 3146250 | 52696.8 |
| galactosyldiacylglycerol synthase | ASC92_09455 | Not Available | Positive | 3146537 - 3147691 | 41216.3 |
| hypothetical protein | ASC92_09460 | Not Available | Positive | 3147688 - 3148188 | 18995.9 |
| protein tyrosine phosphatase | ASC92_09465 | Not Available | Positive | 3148185 - 3148757 | 21288.8 |
| nadh oxidase | ASC92_09470 | Not Available | Positive | 3148845 - 3149975 | 39740.1 |
| two-component system response regulator | ASC92_09475 | Not Available | Negative | 3150082 - 3150780 | 25431.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
