Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nodulation protein nodj | ASC92_09330 | Not Available | Positive | 3119200 - 3120027 | 30332.8 |
| marr family transcriptional regulator | ASC92_09335 | Not Available | Positive | 3120111 - 3120566 | 16636.4 |
| peroxiredoxin | ASC92_09340 | Not Available | Positive | 3120661 - 3121086 | 14183.9 |
| hypothetical protein | ASC92_09345 | Not Available | Positive | 3121231 - 3122364 | 41111.4 |
| serine/threonine protein kinase | ASC92_09350 | Not Available | Positive | 3122399 - 3123433 | 38849.7 |
| lysr family transcriptional regulator | ASC92_09355 | Not Available | Negative | 3123424 - 3124329 | 33288.4 |
| dna alkylation response protein | ASC92_09360 | Not Available | Positive | 3124423 - 3126117 | 61470.2 |
| abc transporter substrate-binding protein | ASC92_09365 | Not Available | Positive | 3126156 - 3127133 | 34071.4 |
| carnitine dehydratase | ASC92_09370 | Not Available | Positive | 3127387 - 3128526 | 40510.6 |
| glycosyl transferase | ASC92_09375 | Not Available | Positive | 3128670 - 3129692 | 36897.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
