Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| twin-arginine translocation pathway signal protein | ASC92_09280 | Not Available | Positive | 3110298 - 3111254 | 33022.0 |
| arsr family transcriptional regulator | ASC92_09285 | Not Available | Negative | 3111267 - 3111959 | 24950.8 |
| cytochrome | ASC92_09290 | Not Available | Positive | 3112075 - 3113226 | 40637.1 |
| pyridoxamine 5'-phosphate oxidase | ASC92_09295 | Not Available | Negative | 3113184 - 3114176 | 35224.8 |
| glutathione s-transferase | ASC92_09300 | Not Available | Negative | 3114173 - 3114823 | 23544.4 |
| lysr family transcriptional regulator | ASC92_09305 | Not Available | Positive | 3114940 - 3115830 | 32805.8 |
| hypothetical protein | ASC92_09310 | Not Available | Negative | 3115843 - 3116370 | 19622.7 |
| hypothetical protein | ASC92_09315 | Not Available | Negative | 3116421 - 3117101 | 23616.3 |
| hypothetical protein | ASC92_09320 | Not Available | Negative | 3117098 - 3117940 | 29851.2 |
| nodulation factor abc transporter atp-binding protein nodi | ASC92_09325 | Not Available | Positive | 3118134 - 3119081 | 34484.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
