Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase subunit tata | ASC92_01365 | Not Available | Positive | 308065 - 308307 | 8507.26 |
| preprotein translocase | ASC92_01370 | Not Available | Positive | 308324 - 308791 | 17223.8 |
| twin-arginine protein translocation system subunit tatc | ASC92_01375 | Not Available | Positive | 308858 - 309667 | 29500.8 |
| 2-alkenal reductase | ASC92_01380 | Not Available | Negative | 309693 - 310862 | 40620.6 |
| nif3-like dinuclear metal center hexameric protein | ASC92_01385 | Not Available | Positive | 311071 - 311844 | 27405.7 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | ASC92_01390 | Not Available | Positive | 311909 - 312949 | 35629.0 |
| large-conductance mechanosensitive channel | ASC92_01395 | Not Available | Negative | 312966 - 313394 | 15086.9 |
| sugar transporter | ASC92_01400 | Not Available | Positive | 313928 - 315004 | 37985.4 |
| vi polysaccharide biosynthesis protein vipa/tvib | ASC92_01405 | Not Available | Positive | 315137 - 316438 | 47387.9 |
| oxidoreductase | ASC92_01410 | Not Available | Positive | 316463 - 317410 | 35672.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
