Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroorotase | ASC92_09140 | Not Available | Positive | 3070899 - 3072185 | 44471.5 |
| glycerol acyltransferase | ASC92_09145 | Not Available | Positive | 3072338 - 3073084 | 27792.5 |
| hypothetical protein | ASC92_09150 | Not Available | Negative | 3073358 - 3073723 | 13872.3 |
| cupin | ASC92_09155 | Not Available | Positive | 3074052 - 3074408 | 13378.0 |
| virulence factor | ASC92_09160 | Not Available | Negative | 3074554 - 3074904 | 12913.6 |
| alcohol dehydrogenase | ASC92_09165 | Not Available | Negative | 3075286 - 3076101 | 27587.5 |
| polyketide synthase | ASC92_27795 | Not Available | Negative | 3078070 - 3082698 | 162328.0 |
| hypothetical protein | ASC92_27800 | Not Available | Negative | 3082698 - 3083312 | 22100.7 |
| phosphoribosylglycinamide formyltransferase | ASC92_09170 | Not Available | Negative | 3085520 - 3086722 | 42457.1 |
| 3-hydroxybutyryl-coa dehydrogenase | ASC92_09175 | Not Available | Positive | 3086905 - 3087753 | 29804.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
