Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pp_02742 | ASC92_09040 | Not Available | Positive | 3047214 - 3048278 | Not Available |
| fis family transcriptional regulator | ASC92_09045 | Not Available | Positive | 3048296 - 3048532 | 9088.16 |
| phosphoribosylaminoimidazolecarboxamide formyltransferase | ASC92_09050 | Not Available | Positive | 3048550 - 3050157 | 57049.2 |
| hypothetical protein | ASC92_09055 | Not Available | Positive | 3050304 - 3050561 | 8538.12 |
| glutamate-1-semialdehyde aminotransferase | ASC92_09060 | Not Available | Negative | 3050808 - 3052094 | 45454.9 |
| hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | ASC92_09065 | Not Available | Negative | 3052094 - 3053056 | 34577.2 |
| rubredoxin | ASC92_09070 | Not Available | Positive | 3053168 - 3053338 | 6256.46 |
| two-component system response regulator | ASC92_09075 | Not Available | Positive | 3053423 - 3053821 | 14656.7 |
| two-component system response regulator | ASC92_09080 | Not Available | Positive | 3053821 - 3054186 | 13575.6 |
| chemotaxis protein chew | ASC92_09085 | Not Available | Positive | 3054206 - 3054739 | 18837.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
