Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s protein | ASC92_08990 | Not Available | Positive | 3037392 - 3038270 | 32386.0 |
| ribose pyranase | ASC92_08995 | Not Available | Negative | 3038281 - 3038673 | 13878.0 |
| ribokinase | ASC92_09000 | Not Available | Negative | 3038670 - 3039635 | 32907.5 |
| laci family transcriptional regulator | ASC92_09005 | Not Available | Negative | 3039632 - 3040729 | 39421.5 |
| abc transporter permease | ASC92_09010 | Not Available | Negative | 3040761 - 3041756 | 33757.1 |
| sugar abc transporter atp-binding protein | ASC92_09015 | Not Available | Negative | 3041753 - 3043348 | 57655.0 |
| laci family transcriptional regulator | ASC92_09020 | Not Available | Negative | 3043474 - 3044418 | 32636.9 |
| gtp-binding protein | ASC92_09025 | Not Available | Positive | 3044627 - 3045718 | 39382.2 |
| glutathione s-transferase | ASC92_09030 | Not Available | Positive | 3045899 - 3046573 | 24886.2 |
| hypothetical protein | ASC92_09035 | Not Available | Negative | 3046574 - 3047038 | 16992.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
