Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazole glycerol phosphate synthase subunit hish | ASC92_01315 | Not Available | Positive | 300595 - 301251 | 24153.9 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | ASC92_01320 | Not Available | Positive | 301315 - 302055 | 25937.0 |
| amino acid abc transporter substrate-binding protein | ASC92_01325 | Not Available | Negative | 302386 - 303300 | 33115.0 |
| c4-dicarboxylate abc transporter | ASC92_01330 | Not Available | Negative | 303312 - 304616 | 46371.3 |
| d-hexose-6-phosphate mutarotase | ASC92_01335 | Not Available | Positive | 304786 - 305619 | 30270.1 |
| imidazole glycerol phosphate synthase subunit hisf | ASC92_01340 | Not Available | Positive | 305642 - 306427 | 27331.4 |
| phosphoribosyl-amp cyclohydrolase | ASC92_01345 | Not Available | Positive | 306469 - 306858 | 14807.5 |
| phosphoribosyl-atp pyrophosphatase | ASC92_01350 | Not Available | Positive | 306855 - 307247 | 14021.4 |
| hypothetical protein | ASC92_01355 | Not Available | Positive | 307261 - 307650 | 14725.3 |
| hit family hydrolase | ASC92_01360 | Not Available | Positive | 307640 - 307999 | 13176.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
