Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein kinase | ASC92_08580 | Not Available | Negative | 2948082 - 2949824 | 63345.4 |
| formate transporter | ASC92_08585 | Not Available | Negative | 2949835 - 2950647 | 28821.0 |
| nitrite reductase small subunit | ASC92_08590 | Not Available | Negative | 2950699 - 2951040 | 11969.3 |
| nitrite reductase | ASC92_08595 | Not Available | Negative | 2951061 - 2953592 | 91446.8 |
| cys-trna(pro)/cys-trna(cys) deacylase | ASC92_08600 | Not Available | Positive | 2953988 - 2954476 | 17392.9 |
| fe-s oxidoreductase | ASC92_08605 | Not Available | Positive | 2954473 - 2954739 | 9833.63 |
| disulfide bond formation protein dsba | ASC92_08610 | Not Available | Positive | 2954736 - 2955380 | 23674.1 |
| mfs transporter | ASC92_08615 | Not Available | Positive | 2955551 - 2957245 | 60521.7 |
| amino acid abc transporter substrate-binding protein | ASC92_08620 | Not Available | Negative | 2957530 - 2958645 | 38893.2 |
| excinuclease abc subunit a | ASC92_08625 | Not Available | Positive | 2958822 - 2964743 | 213930.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
