Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa acetyltransferase | ASC92_08530 | Not Available | Positive | 2938279 - 2939505 | 43701.4 |
| acyl-coa dehydrogenase | ASC92_08535 | Not Available | Positive | 2939502 - 2940671 | 42293.9 |
| acylphosphatase | ASC92_08540 | Not Available | Positive | 2940682 - 2940981 | 10885.9 |
| hypothetical protein | ASC92_08545 | Not Available | Negative | 2941011 - 2941979 | 34558.9 |
| hypothetical protein | ASC92_08550 | Not Available | Negative | 2942055 - 2943011 | 33594.7 |
| citrate synthase | ASC92_08555 | Not Available | Negative | 2943008 - 2943814 | 27811.6 |
| hydroxyquinol 1,2-dioxygenase | ASC92_08560 | Not Available | Negative | 2943839 - 2944741 | 32792.8 |
| carnitine dehydratase | ASC92_08565 | Not Available | Negative | 2944781 - 2945932 | 42013.0 |
| lysr family transcriptional regulator | ASC92_08570 | Not Available | Positive | 2946074 - 2946985 | 33616.1 |
| hydroxymethylglutaryl-coa lyase | ASC92_08575 | Not Available | Positive | 2947146 - 2948066 | 32412.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
