Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylcrotonoyl-coa carboxylase | ASC92_08480 | Not Available | Positive | 2928176 - 2929801 | 57978.7 |
| hypothetical protein | ASC92_08485 | Not Available | Positive | 2929916 - 2931001 | 39197.1 |
| enoyl-coa hydratase | ASC92_08490 | Not Available | Positive | 2930998 - 2931789 | 28267.9 |
| hypothetical protein | ASC92_08495 | Not Available | Positive | 2931799 - 2932470 | 23510.2 |
| 3-methylcrotonyl-coa carboxylase | ASC92_08500 | Not Available | Positive | 2932463 - 2934466 | 72191.1 |
| ethyl tert-butyl ether degradation protein ethd | ASC92_08505 | Not Available | Negative | 2934463 - 2934777 | 11331.7 |
| glyoxylate/hydroxypyruvate reductase a | ASC92_08510 | Not Available | Positive | 2934895 - 2935815 | 33712.8 |
| iclr family transcriptional regulator | ASC92_08515 | Not Available | Positive | 2935903 - 2936652 | 27408.3 |
| cupin | ASC92_08520 | Not Available | Positive | 2936649 - 2937038 | 14169.0 |
| abc transporter substrate-binding protein | ASC92_08525 | Not Available | Positive | 2937066 - 2938085 | 35446.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
