Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metallophosphoesterase | ASC92_08430 | Not Available | Positive | 2916982 - 2917815 | 29883.0 |
| indole acetimide hydrolase | ASC92_08435 | Not Available | Positive | 2918007 - 2919425 | 47889.8 |
| luxr family transcriptional regulator | ASC92_08440 | Not Available | Negative | 2919436 - 2920185 | 28110.7 |
| hypothetical protein | ASC92_08445 | Not Available | Positive | 2920354 - 2920788 | 16284.1 |
| thiamine biosynthesis protein thic | ASC92_08450 | Not Available | Positive | 2921011 - 2922897 | 69580.8 |
| had family hydrolase | ASC92_08455 | Not Available | Positive | 2922951 - 2923643 | 24382.3 |
| thioredoxin | ASC92_08460 | Not Available | Positive | 2923665 - 2923994 | 12017.3 |
| arac family transcriptional regulator | ASC92_08465 | Not Available | Negative | 2924011 - 2925039 | 38934.0 |
| isovaleryl-coa dehydrogenase | ASC92_08470 | Not Available | Positive | 2925179 - 2926351 | 42449.7 |
| amp-binding protein | ASC92_08475 | Not Available | Positive | 2926500 - 2928179 | 62098.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
