Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-acp reductase | ASC92_08380 | Not Available | Negative | 2905910 - 2906680 | 26942.2 |
| pseudouridine synthase | ASC92_08385 | Not Available | Negative | 2906756 - 2907676 | 34854.1 |
| protein kinase | ASC92_08390 | Not Available | Negative | 2907673 - 2908980 | 47044.6 |
| zn-dependent hydrolase | ASC92_08395 | Not Available | Negative | 2908990 - 2910060 | 39741.0 |
| merr family transcriptional regulator | ASC92_08400 | Not Available | Positive | 2910168 - 2910587 | 15595.8 |
| carbonate dehydratase | ASC92_08405 | Not Available | Positive | 2910618 - 2911406 | 28692.1 |
| isocitrate dehydrogenase | ASC92_08410 | Not Available | Positive | 2911436 - 2913256 | 70718.5 |
| acetyl-coa acetyltransferase | ASC92_08415 | Not Available | Positive | 2913303 - 2914487 | 40843.5 |
| carboxypeptidase | ASC92_08420 | Not Available | Positive | 2914576 - 2915823 | 43998.5 |
| acyl-coa dehydrogenase | ASC92_08425 | Not Available | Positive | 2915855 - 2916985 | 40213.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
