Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-binding protein | ASC92_08280 | Not Available | Negative | 2884756 - 2886135 | 50084.7 |
| abc transporter atp-binding protein | ASC92_08285 | Not Available | Negative | 2886145 - 2886954 | 29215.0 |
| nitrate/sulfonate/bicarbonate abc transporter atp-binding protein | ASC92_08290 | Not Available | Negative | 2886951 - 2887787 | 30644.4 |
| abc transporter substrate-binding protein | ASC92_08295 | Not Available | Negative | 2887808 - 2888791 | 35569.8 |
| creatinine amidohydrolase | ASC92_08300 | Not Available | Negative | 2888863 - 2889726 | 31386.6 |
| amidohydrolase | ASC92_08305 | Not Available | Negative | 2889744 - 2891015 | 46298.6 |
| spore coat protein u | ASC92_08310 | Not Available | Positive | 2891424 - 2891936 | 16652.6 |
| pilus assembly protein papd | ASC92_08315 | Not Available | Positive | 2891947 - 2892675 | 25851.3 |
| fimbrial assembly protein | ASC92_08320 | Not Available | Positive | 2892710 - 2895034 | 82229.6 |
| spore coat protein | ASC92_08325 | Not Available | Positive | 2895031 - 2896059 | 34568.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
