Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | ASC92_01265 | Not Available | Positive | 292371 - 293318 | 34606.9 |
| metal-dependent hydrolase | ASC92_01270 | Not Available | Positive | 293324 - 294079 | 27598.6 |
| bola family transcriptional regulator | ASC92_01275 | Not Available | Positive | 294100 - 294342 | 9089.81 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | ASC92_01280 | Not Available | Positive | 294384 - 295685 | 46137.1 |
| atp phosphoribosyltransferase | ASC92_01285 | Not Available | Positive | 295682 - 296323 | 23044.2 |
| histidinol dehydrogenase | ASC92_01290 | Not Available | Positive | 296335 - 297657 | 46631.7 |
| hypothetical protein | ASC92_01295 | Not Available | Positive | 297696 - 298529 | 29722.1 |
| hypothetical protein | ASC92_01300 | Not Available | Positive | 298529 - 298882 | 12863.5 |
| histidinol-phosphate aminotransferase | ASC92_01305 | Not Available | Positive | 298879 - 299970 | 39216.9 |
| imidazoleglycerol-phosphate dehydratase | ASC92_01310 | Not Available | Positive | 299967 - 300575 | 21899.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
