Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazolonepropionase | ASC92_08115 | Not Available | Negative | 2844969 - 2846219 | 43784.6 |
| hutd | ASC92_08120 | Not Available | Negative | 2846244 - 2846816 | 20639.2 |
| abc transporter permease | ASC92_08125 | Not Available | Negative | 2846819 - 2847487 | 24214.5 |
| abc transporter permease | ASC92_08130 | Not Available | Negative | 2847495 - 2848247 | 27280.0 |
| iclr family transcriptional regulator | ASC92_08135 | Not Available | Negative | 2848293 - 2849024 | 25875.0 |
| urocanate hydratase | ASC92_08140 | Not Available | Negative | 2849156 - 2850883 | 62815.9 |
| histidine ammonia-lyase | ASC92_08145 | Not Available | Negative | 2850916 - 2852475 | 53668.0 |
| histidine utilization repressor | ASC92_08150 | Not Available | Negative | 2852536 - 2853273 | 27642.1 |
| sulfonate abc transporter atp-binding protein | ASC92_08155 | Not Available | Negative | 2853537 - 2854331 | 29447.6 |
| abc transporter permease | ASC92_08160 | Not Available | Negative | 2854316 - 2855194 | 31081.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
