Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide synthesis protein gtra | ASC92_08060 | Not Available | Negative | 2832019 - 2832420 | 14299.5 |
| glycosyl transferase | ASC92_08065 | Not Available | Negative | 2832417 - 2833412 | 35828.4 |
| hypothetical protein | ASC92_08070 | Not Available | Negative | 2833409 - 2835220 | 66054.8 |
| hypothetical protein | ASC92_08080 | Not Available | Negative | 2838209 - 2838646 | 15779.6 |
| lysr family transcriptional regulator | ASC92_08085 | Not Available | Positive | 2838749 - 2839675 | 32962.7 |
| ligand-binding protein sh3 | ASC92_08090 | Not Available | Negative | 2839688 - 2840392 | 24688.3 |
| 5-methyltetrahydrofolate--homocysteine methyltransferase | ASC92_08095 | Not Available | Negative | 2840471 - 2841526 | 37528.6 |
| histidinol-phosphate aminotransferase | ASC92_08100 | Not Available | Negative | 2841580 - 2842743 | 41026.5 |
| n-formylglutamate deformylase | ASC92_08105 | Not Available | Negative | 2842764 - 2843582 | 29722.3 |
| n-formimino-l-glutamate deiminase | ASC92_08110 | Not Available | Negative | 2843590 - 2844972 | 49704.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
