Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | ASC92_08010 | Not Available | Negative | 2820920 - 2821717 | 28795.1 |
| abc transporter permease | ASC92_08015 | Not Available | Negative | 2821714 - 2823645 | 68543.4 |
| abc transporter substrate-binding protein | ASC92_08020 | Not Available | Negative | 2823670 - 2824875 | 43635.3 |
| peptide synthetase | ASC92_08025 | Not Available | Negative | 2825013 - 2825597 | 20347.6 |
| hypothetical protein | ASC92_08030 | Not Available | Negative | 2825629 - 2826270 | 22741.5 |
| thiamine biosynthesis protein apbe | ASC92_08035 | Not Available | Negative | 2826292 - 2827197 | 32239.4 |
| 6-hydroxynicotinate reductase | ASC92_08040 | Not Available | Negative | 2827353 - 2828969 | 57232.6 |
| ferredoxin-nadp reductase | ASC92_08045 | Not Available | Positive | 2829294 - 2830067 | 29266.2 |
| tetr family transcriptional regulator | ASC92_08050 | Not Available | Positive | 2830087 - 2830854 | 28461.6 |
| enamidase | ASC92_08055 | Not Available | Positive | 2830800 - 2831999 | 41411.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
