Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion protein | ASC92_07905 | Not Available | Negative | 2793610 - 2793990 | 13531.0 |
| hypothetical protein | ASC92_07910 | Not Available | Negative | 2794006 - 2794665 | 23661.7 |
| hypothetical protein | ASC92_07915 | Not Available | Negative | 2794712 - 2795761 | 39020.8 |
| hypothetical protein | ASC92_07920 | Not Available | Negative | 2795758 - 2798337 | 95079.0 |
| hypothetical protein | ASC92_07925 | Not Available | Negative | 2798393 - 2798791 | 14223.6 |
| clpv1 family t6ss atpase | ASC92_07935 | Not Available | Negative | 2801228 - 2803948 | 98168.7 |
| hypothetical protein | ASC92_07940 | Not Available | Negative | 2803945 - 2804913 | 36342.5 |
| type vi secretion system protein impg | ASC92_07945 | Not Available | Negative | 2805114 - 2806985 | 69425.7 |
| hypothetical protein | ASC92_07950 | Not Available | Negative | 2807107 - 2807634 | 19786.6 |
| virulence protein scie type | ASC92_07955 | Not Available | Negative | 2807643 - 2808506 | 31371.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
