Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent protease | ASC92_07855 | Not Available | Positive | 2778551 - 2780095 | 54335.0 |
| serine/threonine protein kinase | ASC92_07860 | Not Available | Negative | 2780127 - 2782076 | 68673.2 |
| type vi secretion system protein impm | ASC92_07865 | Not Available | Negative | 2782123 - 2782836 | 25970.7 |
| hypothetical protein | ASC92_07870 | Not Available | Negative | 2783175 - 2786840 | 135724.0 |
| hypothetical protein | ASC92_07875 | Not Available | Negative | 2786840 - 2788246 | 50234.1 |
| type vi secretion protein | ASC92_07880 | Not Available | Negative | 2788255 - 2789634 | 50959.3 |
| type vi secretion protein | ASC92_07885 | Not Available | Negative | 2789805 - 2790323 | 19079.1 |
| hypothetical protein | ASC92_07890 | Not Available | Positive | 2790455 - 2790862 | 14798.8 |
| hypothetical protein | ASC92_07895 | Not Available | Positive | 2790930 - 2792792 | 64967.5 |
| serine/threonine protein phosphatase | ASC92_07900 | Not Available | Positive | 2792785 - 2793600 | 29250.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
