Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione peroxidase | ASC92_07805 | Not Available | Positive | 2768078 - 2768569 | 17427.9 |
| hypothetical protein | ASC92_07810 | Not Available | Negative | 2768588 - 2769025 | 14555.5 |
| glycolate oxidase iron-sulfur subunit | ASC92_07815 | Not Available | Negative | 2769117 - 2770349 | 44513.8 |
| glycolate oxidase | ASC92_07820 | Not Available | Negative | 2770363 - 2771481 | 39402.1 |
| glycolate oxidase subunit glcd | ASC92_07825 | Not Available | Negative | 2771739 - 2773241 | 53491.5 |
| lysr family transcriptional regulator | ASC92_07830 | Not Available | Negative | 2773383 - 2774267 | 32402.8 |
| gluconolactonase | ASC92_07835 | Not Available | Negative | 2774476 - 2775408 | 33894.8 |
| ammonia channel protein | ASC92_07840 | Not Available | Negative | 2775594 - 2777027 | 47963.7 |
| transcriptional regulator | ASC92_07845 | Not Available | Negative | 2777057 - 2777395 | 12259.9 |
| hypothetical protein | ASC92_07850 | Not Available | Negative | 2777460 - 2778332 | 30492.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
