Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sam-dependent methyltransferase | ASC92_01215 | Not Available | Positive | 280170 - 281057 | 32754.5 |
| transposase | ASC92_01220 | Not Available | Positive | 281075 - 281770 | 26010.9 |
| glutamate synthase | ASC92_01225 | Not Available | Positive | 281956 - 286713 | 173041.0 |
| glutamate synthase | ASC92_01230 | Not Available | Positive | 286748 - 288226 | 53728.1 |
| abc transporter atp-binding protein | ASC92_01235 | Not Available | Positive | 288293 - 289156 | 31076.4 |
| abc transporter permease | ASC92_01240 | Not Available | Positive | 289153 - 289935 | 27860.8 |
| outer membrane lipid asymmetry maintenance protein mlad | ASC92_01245 | Not Available | Positive | 289975 - 290466 | 17320.7 |
| abc transporter | ASC92_01250 | Not Available | Positive | 290463 - 291233 | 27512.4 |
| hypothetical protein | ASC92_01255 | Not Available | Positive | 291393 - 292049 | 23888.7 |
| anti-anti-sigma factor | ASC92_01260 | Not Available | Positive | 292062 - 292337 | 9567.72 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
